As discussed in Exporting standalone batch runs, Stefan König and Axel Pürkhauer developed a .command file for Repast that will run in “batch mode” on non-development Mac and *nix machines. That file appears below. (I’ve also posted a sample .bat file and a sample .sh file, both contributed by others. You may get some benefit from looking at those as well.)
start_model.command, modified by Stefan König and Axel Pürkhauer in 2010 to use BatchMain
#!/bin/bash
# Repast Simphony Model Starter
# By Michael J. North and Jonathan Ozik
# 11/12/2007
# Edited by Stefan König for use with batch files
# Note the Repast Simphony Directories.
PWD="${0%/*}"
cd $PWD
REPAST_VERSION=1.2.0
REPAST_BASE=$PWD/repast.simphony
REPAST_SIMPHONY_ROOT=$REPAST_BASE/repast.simphony.runtime_$REPAST_VERSION
REPAST_SIMPHONY_LIB=$REPAST_SIMPHONY_ROOT/lib
# Define the Core Repast Simphony Directories and JARs
CP=$CP:$REPAST_BASE/repast.simphony.batch_$REPAST_VERSION/bin
CP=$CP:$REPAST_BASE/repast.simphony.runtime_$REPAST_VERSION/lib/*
CP=$CP:$REPAST_BASE/repast.simphony.core_$REPAST_VERSION/lib/*
CP=$CP:$REPAST_BASE/repast.simphony.core_$REPAST_VERSION/bin
CP=$CP:$REPAST_SIMPHONY_ROOT/bin
CP=$CP:$REPAST_SIMPHONY_ROOT/bin-groovy
CP=$CP:$REPAST_BASE/repast.simphony.score.runtime_$REPAST_VERSION/lib/*
CP=$CP:$REPAST_BASE/repast.simphony.score.runtime_$REPAST_VERSION/bin
CP=$CP:$REPAST_BASE/repast.simphony.dataLoader_$REPAST_VERSION/bin
CP=$CP:$REPAST_BASE/repast.simphony.data_$REPAST_VERSION/bin
CP=$CP:$REPAST_BASE/repast.simphony.score_$REPAST_VERSION/bin
CP=$CP:$PWD/yourModelDirectory/bin #### NOTE: yourModelDirectory
CP=$CP:$REPAST_SIMPHONY_LIB/saf.core.runtime.jar
CP=$CP:$REPAST_SIMPHONY_LIB/commons-logging-1.0.4.jar
CP=$CP:$REPAST_SIMPHONY_LIB/groovy-all-1.5.7.jar
CP=$CP:$REPAST_SIMPHONY_LIB/javassist-3.7.0.GA.jar
CP=$CP:$REPAST_SIMPHONY_LIB/jpf.jar
CP=$CP:$REPAST_SIMPHONY_LIB/jpf-boot.jar
CP=$CP:$REPAST_SIMPHONY_LIB/log4j-1.2.13.jar
CP=$CP:$REPAST_SIMPHONY_LIB/xpp3_min-1.1.4c.jar
CP=$CP:$REPAST_SIMPHONY_LIB/xstream-1.3.jar
CP=$CP:$REPAST_BASE/repast.simphony.data_$REPAST_VERSION/lib/*
# Change to the Default Repast Simphony Directory
cd yourModelDirectory #### NOTE: yourModelDirectory
# Start the Model
/path/to/bin/java -Xss10M -Xmx400M -cp $CP repast.simphony.batch.BatchMain -params $PWD/batch/params.xml yourModel .rs